Insertion junction: CLIP2.027315_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027315
Chromosome:chromosome 16
Location:1552313
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653450 BAR1 Bin/Amphiphysin/Rvs domain protein 1; (1 of 1) PF03114 - BAR domain (BAR) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTCGGTCTGGGTGGTTTCCGCTTCCCACACGCTTGACCTTGCCCACCG
Internal bar code:TCCCTAATGGGGCAATTGCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4243
LEAP-Seq percent confirming:51.2821
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:TGAACGGTAAACATGCGGGA
Suggested primer 2:CGCTAGAGTTCTCCGCTCTG