Insertion junction: CLIP2.027317_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027317
Chromosome:chromosome 2
Location:839536
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800174 (1 of 1) IPR001874//IPR024616 - Dehydroquinase, class II // Pherophorin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGGCAGCTCCATCTGCACGGGTGCATGGCGACGACGTGGAATCACAA
Internal bar code:GGGTTTCCATAACGTGAACACG

Confirmation - LEAP-Seq

LEAP-Seq distance:440
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTAATTTCCCCCACCGTG
Suggested primer 2:CTTTAGGTGAAGGGGGCCTG