Insertion junction: CLIP2.027322_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.027322
Chromosome:chromosome 12
Location:6173400
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g535700 HSP70D (1 of 2) PTHR19375:SF173 - CHAPERONE PROTEIN DNAK; Heat shock protein 70D CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACCTCGTCCGCCTCCGACAGCGAGTGCTTGGCCGCCTGCGCCAGCGC
Internal bar code:TGTGACTTGGTCGGAGTTTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1214
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACTCCTTCCTCACCAC
Suggested primer 2:GCCCCTTCCTTCCCTGTTAC