Insertion junction: CLIP2.027329_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027329
Chromosome:chromosome 9
Location:4774682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402367 (1 of 1) PTHR10562//PTHR10562:SF18 - SMALL UBIQUITIN-RELATED MODIFIER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTAACGGAAAGCGAGCCCCACGGTGCAAACCCCACCGCCGGCGACCTT
Internal bar code:AGAGGCGTGATATCAGTTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3927
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCCAGCCACCATGAAGT
Suggested primer 2:TCCGGAACCAACAGTACGTG