Insertion junction: CLIP2.027331_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027331
Chromosome:chromosome 12
Location:682957
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g493050 intron
Cre12.g801351 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGCGGGAGTCAGGTCCTTATGCGCGTCACAAGGGTTTACCAAGCGCG
Internal bar code:ATTTAATCAAGGAGGGGGCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2996
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACAGCTGCAGTTTCCCA
Suggested primer 2:TGAGAGGAATGCAGCTGGTG