Insertion junction: CLIP2.027348_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027348
Chromosome:chromosome 7
Location:989996
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319452 PHC73 Putative pherophorin-chlamydomonas homolog; (1 of 2) IPR003072//IPR003882 - Orphan nuclear receptor, NOR1 type // Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGATGGCATGCCGCCACCAGACTCCGCGCCGCCAGGGGACTTCGCGCAG
Internal bar code:TCTGTCACGAGGGCTACGGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1792
LEAP-Seq percent confirming:76.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTGCGTTGCTGTGGATG
Suggested primer 2:CCAGTGTCTACCCACCACAC