Insertion junction: CLIP2.027365_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027365
Chromosome:chromosome 2
Location:942235
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800176 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTAGGCGGCACAGGAGGAGCAGGCGAAGGCGGCGCAGGACTAGGCGGCT
Internal bar code:TGGTACCCTAAGTCTTTTCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5506
LEAP-Seq percent confirming:70.8333
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGTCCTGTGCCGCCTTC
Suggested primer 2:GAAGGCGGCACAGGACTAG