Insertion junction: CLIP2.027371_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027371
Chromosome:chromosome 2
Location:1059791
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g080300 (1 of 5) PTHR10791 - RAG1-ACTIVATING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCAAGGAACTCACCACGGAACCTATCCTGTGCGCTGCAGGCGAGCGAG
Internal bar code:CCTAATAGCCTAGGTTATTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2779
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GATACCTGCACACCAGACCC
Suggested primer 2:GGTCAAGAAACCGTGTGCAC