Insertion junction: CLIP2.027394_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027394
Chromosome:chromosome 9
Location:683532
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g404550 (1 of 2) 2.7.11.20 - [Elongation factor 2] kinase / EF2K intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATCCCAAGCATTGGCCGGCCCAGTTTGAGGTGCACTTTGCGCTCTACC
Internal bar code:GTTTGGGGTGGGCTGGCCATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1469
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGGGTTTTGTCATGCAG
Suggested primer 2:CCGTCGTAGCAGTCCTCATC