Insertion junction: CLIP2.027396_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027396
Chromosome:chromosome 1
Location:1704703
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009400 NSS2 (1 of 2) PTHR11819//PTHR11819:SF12 - SODIUM/SOLUTE SYMPORTER // HIGH-AFFINITY CHOLINE TRANSPORTER 1; Sodium:solute symporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTGGTCACCTCTGTTGCTTGCCTGACCCTCCTCAACCACGCCCTTGA
Internal bar code:GGATCGGGGAGGTTTGCTCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1283
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGTCGAGGTGATGAGCG
Suggested primer 2:ACACGTACATGCGCAAACAC