Insertion junction: CLIP2.027398_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027398
Chromosome:chromosome 9
Location:2634645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392106 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTCTAGGACGAGCTCGTCGCCACGAGTAAAGCACTGAACCGGAAAGG
Internal bar code:GAGCTGGGATGCACAACTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3461
LEAP-Seq percent confirming:98.1132
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCATGTGAGGTCAGGTTC
Suggested primer 2:CAGTTGAGCTGCTCCCTCAA