Insertion junction: CLIP2.027398_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027398
Chromosome:chromosome 9
Location:2634648
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392106 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATGTCTAGAGCCAGCCTGCCCAGCTCGAGCGCCACCTCAGGCTCGAGC
Internal bar code:GAGCTGGGATGCACAACTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:780
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTTGAGCTGCTCCCTCAA
Suggested primer 2:TGGCATGTGAGGTCAGGTTC