Insertion junction: CLIP2.027408_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027408
Chromosome:chromosome 3
Location:3492786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g167250 (1 of 1) PF05673 - Protein of unknown function (DUF815) (DUF815) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGCTTCGTGCTGGTGGCGGACCACGTGGACTTCCCAGTGCGGGGTGC
Internal bar code:TCGGTTTATTTGCTAAGGGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:162
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CAATTTCCACCGCATCCACC
Suggested primer 2:TTTGTGTGATTGCACCGCTG