Insertion junction: CLIP2.027423_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027423
Chromosome:chromosome 12
Location:3130725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500715 (1 of 5) 6.2.1.3 - Long-chain-fatty-acid--CoA ligase / Lignoceroyl-CoA synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAAACGACCCCTCCGCCTGCTGTACCAGTGTGACTGGCTACAACTTCG
Internal bar code:TATTCGAGGGTAGTCGGAAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:216
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGCTCCTGCTTCTCAT
Suggested primer 2:CACCGCATGTGTCGTTTTGT