Insertion junction: CLIP2.027440_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027440
Chromosome:chromosome 16
Location:5083680
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685650 GLR1 Ionotropic glutamate receptor; (1 of 4) PF00060//PF00497 - Ligand-gated ion channel (Lig_chan) // Bacterial extracellular solute-binding proteins, family 3 (SBP_bac_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGGGCCGGAACCCAGCCGGGTACTTGACCTGCAGCGAACGCGAATGA
Internal bar code:GGATCTGCGGGACTCCCTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3945
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:109
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTGCAGGTGTTCAACTG
Suggested primer 2:TCTGCGCGTGATGATGAGAA