Insertion junction: CLIP2.027442_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.027442
Chromosome:chromosome 7
Location:4821826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346000 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACGACGTGTGGCAGCCCCCTGCTTTCCACGTTTCTTCCCCCAGCGCC
Internal bar code:TTTTACTGCACATTACCTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3091
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTACTGGTCGTATGTCCG
Suggested primer 2:GTTTATGTCGTGCGGCTGTG