Insertion junction: CLIP2.027443_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027443
Chromosome:chromosome 13
Location:2179884
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801527 (1 of 1) PF08819 - Domain of unknown function (DUF1802) (DUF1802) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAAGGAAGGGCAGGGAGTGCTGGTACCAGAGGATTGCGGATTTAGAG
Internal bar code:TTTGGACTTAGTTCACGTTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1241
LEAP-Seq percent confirming:98.5075
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCACTTCCCCTCTCGTA
Suggested primer 2:TAATCCCAACCCGAGCACAC