Insertion junction: CLIP2.027445_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027445
Chromosome:chromosome 16
Location:7443030
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g681238 (1 of 1) K03650 - tRNA modification GTPase [EC:3.6.-.-] (mnmE, trmE, MSS1) 5'UTR
Cre16.g681354 (1 of 41) PF13920 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACGAGCTCCAGAGCGAACGCCCCCGTGAGAGCGCGGCTGGGGCTGGTA
Internal bar code:CAAGGGGACGTGGCGGTTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3359
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGTGTGGTGAGGAATTGG
Suggested primer 2:CGCGTCAGCAATCCGTTAAG