Insertion junction: CLIP2.027450_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.027450
Chromosome:chromosome 7
Location:5309807
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349950 (1 of 1) K03131 - transcription initiation factor TFIID subunit 6 (TAF6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGTGGATGTGTGCAAACAAGCTCTCGTGGCGGTGTGGGGCCGGGGTG
Internal bar code:GACTTGTGCGACTCCGGTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:186
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTGTAGTGGGCGGGTTA
Suggested primer 2:ACGCACATACACAAACACGC