Insertion junction: CLIP2.027453_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027453
Chromosome:chromosome 12
Location:1099937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g491250 (1 of 1) IPR003615//IPR010995 - HNH nuclease // DNA repair Rad51/transcription factor NusA, alpha-helical intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCTTCTCGGCTGCATTTACACTTAGGATTTGGGACTGTCGGGGCTGT
Internal bar code:GGCCCATGTGGGTATGTTTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3413
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCAACTCCCTTCGTCCG
Suggested primer 2:CATTCAACTCGGGAGCCCTT