Insertion junction: CLIP2.027455_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027455
Chromosome:chromosome 3
Location:2235869
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800304 intron
Cre03.g800305 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAATTTAGCGCATGTCCGTATACACCTTCCCCCGGCTCCGGCAGCTAT
Internal bar code:AGGTGACGGACCCTGGCGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3820
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAACCGCCGTGTCTAGGA
Suggested primer 2:GTGAAGAGGAAGGAAGGGGC