Insertion junction: CLIP2.027465_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027465
Chromosome:chromosome 3
Location:7962023
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202150 DMC2 (1 of 6) 2.1.1.37 - DNA (cytosine-5-)-methyltransferase / Type II DNA methylase; Putative DNA methylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTGCTCACGCCTAAGTTGTGCATGCTGCCTCCTTTCACCCCTCCAGG
Internal bar code:TAAGCGAATCCGTACTTGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2092
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGGTGAATATGCTGCTG
Suggested primer 2:CCAGCAAAAACGTCGCTTCA