Insertion junction: CLIP2.027467_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027467
Chromosome:chromosome 3
Location:8000208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201850 SRH10 (1 of 2) K10877 - DNA repair and recombination protein RAD54B (RAD54B); SNF2-related DNA/RNA helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGCTCCTTGCCCCAGTTGGCGACCAGCGAGGCCGGGCACAGCACCAG
Internal bar code:TACATCCGATATAGGCTCCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2550
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTCATGGTGCAGTGCATTGC
Suggested primer 2:GCTGTCCACGTTCTTCAGGA