Insertion junction: CLIP2.027479_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027479
Chromosome:chromosome 13
Location:1099717
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569200 SRP54 (1 of 1) PTHR11564//PTHR11564:SF5 - GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS // SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN; 54kDa Subunit of the Signal Recognition Particle intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGACATCCCTGCCGGCGCGGCGGCTGACGCTGCGCCCGAGCCCCAGACC
Internal bar code:GGTAAACATCAATTCTTATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3602
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:TACAATACGCGGCGTAGACC
Suggested primer 2:CGATCGACCTCTCTTCCTGC