Insertion junction: CLIP2.027484_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027484
Chromosome:chromosome 11
Location:4238317
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481866 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAATGCCGCACGCTCGCGCCCCCGCCCGCAATCCCGCAGCCCACACG
Internal bar code:GCTGACGTGCGGGTTGGAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3241
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCACCAACAGCCAACAGC
Suggested primer 2:GCAGAAGTAGCAGCAATGGC