Insertion junction: CLIP2.027484_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027484
Chromosome:chromosome 11
Location:4238317
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481866 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCCAATGGCAGCGTGCGTGTGCAGGACCAGGACCCACGTCATGCATT
Internal bar code:GTCACCGATCAAGAAAAGTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1703
LEAP-Seq percent confirming:24.1379
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAAGTAGCAGCAATGGC
Suggested primer 2:CTTCACCAACAGCCAACAGC