Insertion junction: CLIP2.027485_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.027485
Chromosome:chromosome 9
Location:5270057
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407150 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTATTAACACAGCCGCCGTACTGCAGCGCGTCAAAGCGCGGCCAGGCCT
Internal bar code:CGTTCTTCTTTAATTGGGCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1162
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGTGTGTGTGCTGCCTC
Suggested primer 2:ACAAAACACGCTTAACCGCC