Insertion junction: CLIP2.027486_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027486
Chromosome:chromosome 7
Location:1615354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325250 (1 of 2) PF06977 - SdiA-regulated (SdiA-regulated) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTGGATTTCCGCGAACTTGAGGAATTTCTCCAGCTTATAGCTGCCTA
Internal bar code:GCATCGTAGCGGGCGCGTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1889
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAGCGAGCAACCTAGTA
Suggested primer 2:ACGGGAGGAGCAATGTGATG