Insertion junction: CLIP2.027490_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027490
Chromosome:chromosome 13
Location:4831826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605000 (1 of 107) IPR000719//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCCCTCATCAGCAGCCCTCATCAGCAGCCCTCATCAGCAGCCCGCCC
Internal bar code:TCAAGCTTGGGGCGTTATATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:792
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCTCCACACACATGTAC
Suggested primer 2:TTGGGCACGAGGTGAAGTAC