Insertion junction: CLIP2.027497_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027497
Chromosome:chromosome 12
Location:6147894
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g535400 (1 of 1) IPR000104//IPR003590//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATACCCTTAAATCCATATCACCGCGCGGGCTGCTGCTCACACTCGCACA
Internal bar code:TTGGACCTTGAACCATCTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1910
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTAATGGGTGATGGGGC
Suggested primer 2:CGATACGGTTCTCCAGCCTC