Insertion junction: CLIP2.027500_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.027500
Chromosome:chromosome 11
Location:3291245
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g476400 MAG1 DNA-3-methyladenine glycosylase II; (1 of 1) 3.2.2.21 - DNA-3-methyladenine glycosylase II / DNA-3-methyladenine glycosidase II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCACAAATGTTCTTACATCACATAAACTCCTGACGCCGCAGCCCATGC
Internal bar code:ATAAGGGAAGTGCTTGTTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1692
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AAAACCGTTGGAGCCTCACA
Suggested primer 2:CAGAGCAGAAAACACACCGC