Insertion junction: CLIP2.027507_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.027507
Chromosome:chromosome 4
Location:691965
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217953 (1 of 2) PTHR15241:SF0 - TRANSFORMER-2 SEX-DETERMINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCTCACCACATACTTGCAATCCCGGCGCATGGAAGCGATACGCACCC
Internal bar code:CTGAGATTTTTTGTTATGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2290
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGTCAAGTGAGCTGGCG
Suggested primer 2:TCCAAACAGTTCTCGCCCTC