Insertion junction: CLIP2.027510_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027510
Chromosome:chromosome 12
Location:9525467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540200 HEL58 (1 of 5) K12823 - ATP-dependent RNA helicase DDX5/DBP2 (DDX5, DBP2); DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTATAAGGAGTCATCGGCTGCATGGGGTCAAGTCGGCGGGCGTCGGTT
Internal bar code:AATTCAGGGGATCAGGTTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1286
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTCATCCATGTGTGCCC
Suggested primer 2:GTCTTTCCTGCCTCTCCACC