Insertion junction: CLIP2.027531_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027531
Chromosome:chromosome 1
Location:5481826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038800 MIP3 (1 of 1) K09875 - aquaporin SIP (SIP); Major intrinsic protein superfamily intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGGCTGCCGCGGCGGCTGTGGCTGTTGGCGCCCTGCAGTAAGTTTCAC
Internal bar code:GTGTTGTCCTGATTATTCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3416
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:TACCACGAACGGGTTCAGTG
Suggested primer 2:TGGTGTCAGCAACTTGGTGT