Insertion junction: CLIP2.027535_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027535
Chromosome:chromosome 2
Location:3524074
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099100 (1 of 3) K10587 - ubiquitin-protein ligase E3 A (UBE3A, E6AP); RCC-type HECT ubiquitin ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGCGCAGGCAAGGGCCGGGCAATGCTGGGCGGAGCGGCCAGAGCCTC
Internal bar code:TGGTATCTGTTGTAGTCTCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2828
LEAP-Seq percent confirming:87.0968
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGTGCGTGTTCTGTGTG
Suggested primer 2:AGCTGGTGTCCACGGTTATG