Insertion junction: CLIP2.027535_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027535
Chromosome:chromosome 2
Location:3524362
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099100 (1 of 3) K10587 - ubiquitin-protein ligase E3 A (UBE3A, E6AP); RCC-type HECT ubiquitin ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGATTCCCGTAACTCCCCCGCAAACCCTTTTGCACCGCGCGTCAACT
Internal bar code:TCCAAACCGTACTGCGGCTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2245
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGGTGTCCACGGTTATG
Suggested primer 2:CACTGTGCGTGTTCTGTGTG