Insertion junction: CLIP2.027538_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027538
Chromosome:chromosome 7
Location:5013504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347450 (1 of 4) PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAAAGCACAGGGCAGCTTCCGACACGGTGGCGCACAGCGTCTCAACAG
Internal bar code:ACCCGGGAGGATGGGGCCAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5033
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGTGCATGATGATGTGG
Suggested primer 2:CACTGCCACTGCTACTGCTA