Insertion junction: CLIP2.027543_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027543
Chromosome:chromosome 8
Location:4036427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382689 (1 of 4) K08770 - ubiquitin C (UBC) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCGCGCCGCCGCCCAGCAGCCCCTCCTGGGCCACATCCAGCATGAGC
Internal bar code:TGGTACGTTTACTCGACTAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1764
LEAP-Seq percent confirming:94.3396
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TCTACGCGTACGACTCATGC
Suggested primer 2:ACCCTGCTACTACGGATGGT