Insertion junction: CLIP2.027546_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027546
Chromosome:chromosome 10
Location:2557100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g436400 (1 of 2) PTHR13271//PTHR13271:SF11 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTAGATTAGTTATAGGGAGAACTAACATTAGAAGGAATTTGATTCTCAG
Internal bar code:AGTTAATTAGTCTTGCTGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1671
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGGACAAGGGAGACAGCTTT
Suggested primer 2:AACGCAGTACCGTAACAGCA