Insertion junction: CLIP2.027551_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027551
Chromosome:chromosome 14
Location:405264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610566 (1 of 3) PF02209 - Villin headpiece domain (VHP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCCGGAGGGGGGAGACACGGCATGAGTGAGGCATTTGGAATGCAGGG
Internal bar code:GGCCCAGCACGTGTGGCGACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:542
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACAAACTCCTGGTACGA
Suggested primer 2:ACACCCTATCTCATGCCCCT