Insertion junction: CLIP2.027551_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027551
Chromosome:chromosome 14
Location:405271
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610566 (1 of 3) PF02209 - Villin headpiece domain (VHP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGGCCCCCCTCCTTCCCCCTACCGCTAGGCTGTCGTGCACGTCCGGC
Internal bar code:GGCCCAGCACGTGTGGCGACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:333
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCCTATCTCATGCCCCT
Suggested primer 2:GCCACAAACTCCTGGTACGA