Insertion junction: CLIP2.027555_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027555
Chromosome:chromosome 12
Location:2454139
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507559 HSC20,HSC20B (1 of 1) K04082 - molecular chaperone HscB (hscB, HSCB, HSC20); Co-chaperone, HscB-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCGCAAGTGAGGCACGGCGCAGGGCACGGGCAGCACACGAGCTGACG
Internal bar code:ACTGATGGAATTATCGCTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2157
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGTGTGTGTGTGTGTGT
Suggested primer 2:CCGCTACTCCTGTGGTTTGT