Insertion junction: CLIP2.027556_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027556
Chromosome:chromosome 11
Location:1488266
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g469187 (1 of 98) IPR023214 - HAD-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCAACAGCCCCTCACGAGTCAAAAACCGATAGCTGCACCCCCACTGG
Internal bar code:GGTATCCGTCATTACGAAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1743
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGTTAGGTAGCGGCTAG
Suggested primer 2:GTTGTGGTCCCAACACATGC