Insertion junction: CLIP2.027558_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027558
Chromosome:chromosome 10
Location:4491725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g451000 TRR1 (1 of 1) K15407 - queuine tRNA-ribosyltransferase subunit QTRTD1 [EC:2.4.2.29] (QTRTD1); Queuine tRNA-ribosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAGGTCGCCTCACCATGTGCCCCCCGCTGTGTATGCACACGTGCACC
Internal bar code:TAAGCGGGGGCGCGCTGCTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1215
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTCCTATTGCATGCTGC
Suggested primer 2:GAGTCGGCCGTGATCTGTAG