Insertion junction: CLIP2.027568_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027568
Chromosome:chromosome 6
Location:2920004
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g273100 (1 of 3) PF03067 - Chitin binding domain (Chitin_bind_3) 3'UTR
Cre06.g273150 RRM4 (1 of 2) 2.1.1.166 - 23S rRNA (uridine(2552)-2'-O)-methyltransferase / Um2552 methyltransferase; Putative ribosomal RNA methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACAGCGTGCCAGCCTGGAAGCGTTCTGCTGGCCGCCGCTTCGTCACTC
Internal bar code:ACGGGTTTATTCCAATGTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1881
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGTGGTACAGAGCGTGT
Suggested primer 2:CTTCTGCTGCTGCTGGTAGT