Insertion junction: CLIP2.027572_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027572
Chromosome:chromosome 3
Location:6718588
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195950 (1 of 7) PTHR11584:SF381 - PROTEIN PQN-80, ISOFORM B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACTTATTTATTCCCAGCCCACAGGGGGGGGGCAGGCGGGCAGGGGTGT
Internal bar code:TATTTAACGGGGGCAAGGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3789
LEAP-Seq percent confirming:95.2941
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACCTCAAGCTGCTCCAC
Suggested primer 2:AGCATAGCCCATCCTTGCTC