Insertion junction: CLIP2.027578_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027578
Chromosome:chromosome 2
Location:7837222
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g146200 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTTTGCCAACATAGGCACGCCAATACTGCACCCTGCACTTCCTGTAG
Internal bar code:TGGTAATGAACCGGGTTTCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4310
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCCCTCACAGCATCTTGC
Suggested primer 2:GAGCAGTTCACGGCAATGTG