Insertion junction: CLIP2.027587_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027587
Chromosome:chromosome 5
Location:3059021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800572 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCACGTCCCGTCCGGTCCCCACACAACCCCTCCCCCCTTGACTAATCA
Internal bar code:TGAATAACTGAATCTCGGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2736
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTGAGGCCAGGGATGTG
Suggested primer 2:ATCTACAATCCCGCTCCCCT