Insertion junction: CLIP2.027588_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027588
Chromosome:chromosome 17
Location:3834829
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727400 HRP8 Hydroxyproline-rich glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATAATATTGCTACTACATGTTAGCAAAAGGGATGCCGCGAAAGGCAAC
Internal bar code:CTTACTCTACGTGATAAACGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1957
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGAAGCAGGCCAGGATGT
Suggested primer 2:TGTTCTGTTGCCCAACACCT