Insertion junction: CLIP2.027588_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027588
Chromosome:chromosome 17
Location:3834830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727400 HRP8 Hydroxyproline-rich glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCAGTAGCAACTCAGTACGAAGACGCACCCGATGATGCAGTTGTCGC
Internal bar code:CTTACTCTACGTGATAAACGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2767
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCTGTTGCCCAACACCT
Suggested primer 2:GAAGAAGCAGGCCAGGATGT